Upcoming Event | May 20
OSPool User Training - Adapting Workflows for High Throughput Bioinformatics
Sign Up for our May 20 user training on high throughput bioinformatics!
Sign Up for our May 20 user training on high throughput bioinformatics!
In this workshop, we will create and scale up a BWA bioinformatics workflow using HTCondor on the OSPool, covering general topics such as software, keeping an organized work environment, and HTCondor submit file options. While the workshop covers a bioinformatics example, topics discussed are applicable to any workflow on the OSPool. This workshop is recommended for users who want to learn how to scale up their computing and create workflows.
Prerequisites:
- Some familiarity with shell commands, such as how to edit files, copy/paste in the terminal
- Have an OSPool account and know how to log in, submit a single job
All User Training sessions are offered from 2:30-4:00pm EST on the third Tuesday of the month. It’s best to already have an active account on an OSG Connect login node (or other access point that submits to the Open Science Pool) to follow along with hands-on examples, but anyone can listen in by registering.
Who
OSPool users who want to learn about creating and scaling up their workflows, especially in a bioinformatics setting.
When
Tuesday, May 20 from 2:30-4:00pm EST
Where
Virtual
Questions?
We provide ongoing support via email to [email protected], and it’s never a bad idea to start by sending questions or issues via email. You can typically expect a first response within a few business hours.