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OSPool Documentation
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Welcome
Docs
Tutorials and Software Examples
Reference
OSPool Documentation
Home
Welcome
Welcome
Get Started
Get Started
Test Drive the OSPool
Computation on the Open Science Pool
Start Here: Overview of Requesting OSPool Access
Roadmap to HTC Workload Submission
Education And Training
Education And Training
Monthly OSG User Training
Past Training Materials
OSPool Resources for Teaching & Education
Get Help!
Get Help!
Email, Office Hours, and 1-1 Meetings
Docs
Docs
Accessing Your OSPool Account
Accessing Your OSPool Account
Log In to uw.osg-htc.org Access Points
Log In to OSG Connect Access Points
Launch a JupyterLab Instance
Generate SSH Keys
Set and View Project Usage
HTC Workload Planning, Testing, and Scaling Up
HTC Workload Planning, Testing, and Scaling Up
Overview: Submit Jobs to the OSPool using HTCondor
Easily Submit Multiple Jobs
Determining the Amount of Resources to Request in a Submit File
Job Duration Categories
Convert your workflow from Slurm to HTCondor
Managing Data For Jobs
Managing Data For Jobs
Overview: Data Staging and Transfer to Jobs
Transfer Smaller Job Files to and from /home
Transfer Larger Job Files and Containers Using OSDF
Transfer HTTP-available Files up to 1GB In Size
Use scp To Transfer Files To and From OSG Managed Access Points
Using Software
Using Software
Overview: Software on the Open Science Pool
Compiling Software
Containers - Overview
Containers - Apptainer/Singularity
Containers - Docker
Containers - Predefined List
Monitor, Review, and Troubleshoot Jobs
Monitor, Review, and Troubleshoot Jobs
Monitor and Review Jobs With condor_q and condor_history
Troubleshooting Job Errors
Considerations For Specific Resource Needs
Considerations For Specific Resource Needs
Control Where Your Jobs Run/Job Requirements
GPU Jobs
ARM64
Checkpointing Jobs
Large Memory Jobs
Multicore Jobs
OpenMPI Jobs
EL9 Transition
Automated Workflows
Automated Workflows
Overview: Submit Workflows with HTCondor's DAGMan
Simple Example of a DAGMan Workflow
Use Pegasus to Manage Workflows on OSPool Access Points
Tutorials and Software Examples
Tutorials and Software Examples
Research Examples
Research Examples
FastQC Quality Control
FreeSurfer
Running a Molecule Docking Job with AutoDock Vina
Finding OSG Locations
Analyzing .csv Data with R
Wordcount Tutorial for Submitting Multiple Jobs
PyTorch
scikit-learn
TensorFlow
Software Examples and Tutorials
Software Examples and Tutorials
Example Software Compilation
Basics of compiled MATLAB applications - Hello World example
Run Python Scripts on the OSPool
Run R scripts on the OSPool
Use External Packages in your R Jobs
Using Julia on the OSPool
Using Java in Jobs
Conda with Containers
Conda with Tarballs
Job Submission and Organization Tutorials
Job Submission and Organization Tutorials
Quickstart-Submit Example HTCondor Jobs
Organizing and Submitting HTC Workloads
Submit and Resubmit Multiple Jobs using Bash Scripting
Scaling Up With HTCondor’s Queue Command
Scaling up compute resources
Intermediate DAGMan: Uses and Features
Reference
Reference
Reference and Policies
Reference and Policies
Policies for Using OSG Services and the OSPool
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Frequently Asked Questions
OSG Accounting (GRACC)
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